Author Archives: Attention to the Unseen
Music: Weather Report — ‘Man In The Green Shirt’
From chimps to bees and bacteria, how animals hold elections
By Robert John Young, University of Salford
Lots of people find elections dull, but there’s nothing boring about the political manoeuvres that take place in the animal kingdom. In the natural world, jockeying for advantage, whether this is conscious or merely mechanical, can be a matter of life or death.
Chimpanzees, our closest relatives, are highly political. They’re smart enough to realise that in the natural world brute strength will only get you so far – getting to the top of a social group and remaining there requires political guile.
It’s all about making friends and influencing others. Chimps make friends by grooming each other and forming alliances; this behaviour is especially prominent in males wishing to be group leader. In times of dispute they call upon their friends for assistance or when they sense a coup may be successful. And the ruling group either reaffirms its position or a new group grabs control – but having the weight of numbers is normally critical to success.
Back in the 1980s, the leading Dutch primatologist Frans de Waal spent six years researching the world’s largest captive colony for his classic book Chimpanzee Politics. He soon realised that, in addition to forming cliques, chimp politics still involves some degree of aggression.
Humans in modern societies have largely replaced antagonistic takeovers with voting. Chimps do not, however, live in a democratic society. For them, the social structure of the ruling party is usually one based on male hierarchy, where dominant individuals have best access to the resources available – usually food and females.
Music: Weather Report — ‘Gibraltar’
A Norwegian campaign to legitimize the use of psychedelics
The New York Times reports: In a country so wary of drug abuse that it limits the sale of aspirin, Pal-Orjan Johansen, a Norwegian researcher, is pushing what would seem a doomed cause: the rehabilitation of LSD.
It matters little to him that the psychedelic drug has been banned here and around the world for more than 40 years. Mr. Johansen pitches his effort not as a throwback to the hippie hedonism of the 1960s, but as a battle for human rights and good health.
In fact, he also wants to manufacture MDMA and psilocybin, the active ingredients in two other prohibited substances, Ecstasy and so-called magic mushrooms.
All of that might seem quixotic at best, if only Mr. Johansen and EmmaSofia, the psychedelics advocacy group he founded with his American-born wife and fellow scientist, Teri Krebs, had not already won some unlikely supporters, including a retired Norwegian Supreme Court judge who serves as their legal adviser.
The group, whose name derives from street slang for MDMA and the Greek word for wisdom, stands in the vanguard of a global movement now pushing to revise drug policies set in the 1970s. That it has gained traction in a country so committed to controlling drug use shows how much old orthodoxies have crumbled. [Continue reading…]
Music: Weather Report — ‘Speechless’
Chain reactions spreading ideas through science and culture
David Krakauer writes: On Dec. 2, 1942, just over three years into World War II, President Roosevelt was sent the following enigmatic cable: “The Italian navigator has landed in the new world.” The accomplishments of Christopher Columbus had long since ceased to be newsworthy. The progress of the Italian physicist, Enrico Fermi, navigator across the territories of Lilliputian matter — the abode of the microcosm of the atom — was another thing entirely. Fermi’s New World, discovered beneath a Midwestern football field in Chicago, was the province of newly synthesized radioactive elements. And Fermi’s landing marked the earliest sustained and controlled nuclear chain reaction required for the construction of an atomic bomb.
This physical chain reaction was one of the links of scientific and cultural chain reactions initiated by the Hungarian physicist, Leó Szilárd. The first was in 1933, when Szilárd proposed the idea of a neutron chain reaction. Another was in 1939, when Szilárd and Einstein sent the now famous “Szilárd-Einstein” letter to Franklin D. Roosevelt informing him of the destructive potential of atomic chain reactions: “This new phenomenon would also lead to the construction of bombs, and it is conceivable — though much less certain — that extremely powerful bombs of a new type may thus be constructed.”
This scientific information in turn generated political and policy chain reactions: Roosevelt created the Advisory Committee on Uranium which led in yearly increments to the National Defense Research Committee, the Office of Scientific Research and Development, and finally, the Manhattan Project.
Life itself is a chain reaction. Consider a cell that divides into two cells and then four and then eight great-granddaughter cells. Infectious diseases are chain reactions. Consider a contagious virus that infects one host that infects two or more susceptible hosts, in turn infecting further hosts. News is a chain reaction. Consider a report spread from one individual to another, who in turn spreads the message to their friends and then on to the friends of friends.
These numerous connections that fasten together events are like expertly arranged dominoes of matter, life, and culture. As the modernist designer Charles Eames would have it, “Eventually everything connects — people, ideas, objects. The quality of the connections is the key to quality per se.”
Dominoes, atoms, life, infection, and news — all yield domino effects that require a sensitive combination of distances between pieces, physics of contact, and timing. When any one of these ingredients is off-kilter, the propagating cascade is likely to come to a halt. Premature termination is exactly what we might want to happen to a deadly infection, but it is the last thing that we want to impede an idea. [Continue reading…]
Music: Weather Report — ‘Young and Fine’
Is our universe the only universe?
Music: Airto Moreira — ‘Samba de Flora’
Music: Joni Mitchell — ‘Edith And The Kingpin’
Music: Bossacucanova with Marcela Mangabeira — ‘Ficar’
Resurrecting ancient proteins to illuminate the origins of life
Emily Singer writes: About 4 billion years ago, molecules began to make copies of themselves, an event that marked the beginning of life on Earth. A few hundred million years later, primitive organisms began to split into the different branches that make up the tree of life. In between those two seminal events, some of the greatest innovations in existence emerged: the cell, the genetic code and an energy system to fuel it all. All three of these are essential to life as we know it, yet scientists know disappointingly little about how any of these remarkable biological innovations came about.
“It’s very hard to infer even the relative ordering of evolutionary events before the last common ancestor,” said Greg Fournier, a geobiologist at the Massachusetts Institute of Technology. Cells may have appeared before energy metabolism, or perhaps it was the other way around. Without fossils or DNA preserved from organisms living during this period, scientists have had little data to work from.
Fournier is leading an attempt to reconstruct the history of life in those evolutionary dark ages — the hundreds of millions of years between the time when life first emerged and when it split into what would become the endless tangle of existence.
He is using genomic data from living organisms to infer the DNA sequence of ancient genes as part of a growing field known as paleogenomics. In research published online in March in the Journal of Molecular Evolution, Fournier showed that the last chemical letter added to the code was a molecule called tryptophan — an amino acid most famous for its presence in turkey dinners. The work supports the idea that the genetic code evolved gradually. [Continue reading…]
Music: Bossacucanova with Marcos Valle — ‘Samba de Verao’
Music: Bossacucanova — ‘Bom Dia Rio (Posto 6)’
What ants can teach us about the operation of the human brain
Carrie Arnold writes: Deborah Gordon spent the morning of August 27 watching a group of harvester ants foraging for seeds outside the dusty town of Rodeo, N.M. Long before the first rays of sun hit the desert floor, a group of patroller ants was already on the move. Their task was to find out whether the area near the nest was free from flash floods, high winds, and predators. If they didn’t return to the nest, departing foragers would know it wasn’t safe to go search for food.
When the patrollers returned and the first foragers did leave, they scattered in all directions, hunting for the fat-laden, energy-rich seeds on which the colony depends. Other foragers waited in the entrance of the nest for the first wave to return. If lots of food were nearby, foragers would return and depart quickly, creating a massive chain reaction. If food was scarce, however, the second group of foragers might not leave the nest at all.
“It’s a brilliant system. The ants can take advantage of sudden windfalls of food but they don’t waste energy and resources if there’s nothing there,” said Gordon, who is an ecologist at Stanford University.
The behavior of each individual in the group is set by the rate at which it meets other ants and a set of basic rules. Its behavior alters that of its neighbors, which in turn affects the original ant, in a classic example of feedback. The result is astonishing, complex behavior. “Individually, an ant is dumb,” Gordon says. She gazes off into the distance and inhales sharply. “But the colony? That’s where the intelligence is.”
About 110 miles from Gordon’s offices in Palo Alto, Calif., Mark Goldman studies a different kind of complex, emergent behavior. Goldman is a neuroscientist at the University of California, Davis. For most of his life, he was never particularly interested in ants. But when he traveled to Stanford in 2012 to plan some experiments with a colleague who had recently attended one of Gordon’s talks, something clicked.
“As I watched films of these ant colonies, it looked like what was happening at the synapse of neurons. Both of these systems accumulate evidence about their inputs—returning ants or incoming voltage pulses—to make their decisions about whether to generate an output—an outgoing forager or a packet of neurotransmitter,” Goldman said. On his next trip to Stanford, he extended his stay. An unusual research collaboration had begun to coalesce: Ants would be used to study the brain, and the brain, to study ants. [Continue reading…]
The man who drank cholera and launched the yogurt craze
Lina Zeldovich writes: What do Jamie Lee Curtis, gut bacteria, and a long forgotten Russian scientist have in common? Why, yogurt, of course. But wait, the answer is not that easy. Behind it stretches a tale that shows you can never predict cultural influence. It wends its way through the Pasteur Institute, the Nobel Prize, one of the hottest fields of scientific research today, the microbiome, and one of the trendiest avenues in nutrition, probiotics. It all began in the 19th century with a hyperactive kid in Russia who had a preternatural ability to connect dots where nobody saw dots at all.
When Ilya Metchnikoff was 8 and running around on his parents’ Panassovka estate in Little Russia, now Ukraine, he was making notes on the local flora like a junior botanist. He gave science lectures to his older brothers and local kids whose attendance he assured by paying them from his pocket money. Metchnikoff earned the nickname “Quicksilver” because he was in constant motion, always wanting to see, taste, and try everything, from studying how his father played card games to learning to sew and embroider with the maids. His wife later wrote in The Life of Ellie Metchnikoff that Metchnikoff asked the “queerest” questions, often exasperating his caretakers. “He could only be kept quiet when his curiosity was awakened by observation of some natural objects such as an insect or a butterfly.”
At 16, Metchnikoff borrowed a microscope from a university professor to study the lower organisms. Darwin’s On the Origin of Species shaped his comparative approach to science during his university years — he viewed all organisms, and physiological processes that took place in them, as interconnected and related.
That ability led him to the discovery of a particular cell and enabled him to link digestive processes in primitive creatures to the human body’s immune defenses. In lower organisms, which lack the abdominal cavity and intestines, digestion is accomplished by a particular type of cells — mobile mesodermal cells — that move around engulfing and dissolving food particles. While staring at mesodermal cells inside transparent starfish larvae, Metchnikoff, 37 at the time, had a thought. “It struck me that similar cells might serve in the defense of the organisms against intruders,” he wrote. He fetched a few rose thorns from the garden and stuck them into the larvae. If his hypothesis was correct, the larva’s body would recognize thorns as intruders and mesodermal cells would aggregate around the thorns in an attempt to gobble them up. As Metchnikoff expected, the mesodermal cells surrounded the thorns, proving his theory. He named his cells phagocytes, which in Greek means “devouring cells,” and likened them to an “army hurling itself upon the enemy.” [Continue reading…]